I grud,fie nXy-lcYgi-e
si ctnialchley rnddsecoie a apyi“rrm inoam acdi rutcturse of a rn”toipe niesc eth iodefinnit fo a irmyrPa uecrtsrtu of a iotrnep si a“ reianl achin fo omnia sad.ic” fI you smes thiw the riPymra utr,usertc as ni eth euiontqs m,set ouy cnonat mrfo the ycdnoeSra ucstruetr of het e,otirpn ihchw is medneriedt by hte rbnohddegngyin-o whhic sourcc enwtbee eth tpedpie bnbaekoc, neindtndeep of the R ps.roug I ohpe tsih mdae .ssene
mFor pdaiwkiie: eoycndarS“ utucrstre is lrmayofl efedind by eht eptartn of henrodyg obnds netweeb the imnoa hregnoyd dan xyracbol yxneog smato ni het dtepeip bnboakce”. p(saeimsh )meni
From Molecular Biology of the Cell:
Biologists distinguish four levels of organization in the structure of a protein. The amino acid sequence is known as the primary structure
of the protein. Stretches of polypeptide chain that form α helices and β sheets constitute the protein’s secondary structure
. The full three-dimensional organization of a polypeptide chain is sometimes referred to as the protein’s tertiary structure
, and if a particular protein molecule is formed as a complex of more than one polypeptide chain, the complete structure is designated as the quaternary structure
.
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0"9% have na btaenidfeiil eegtinc mntoaitu LO
C A11 nad LCO A21
euascs lornmbaa lcglaeon csgklnnros-ii via a ecylngi btuoitutsnis in eht lrocgnolpae olucmele "
ihchw msena tath OI ash a gneclyi otstuitinusb adn hertfore tsi ebluna ot morf a darenscoy stcru.uture
Deu ot ycnie'slg sllma zes,i it ertscae nskki"" in eth aomin dica euecqnes. shTee knkis rea eneedd ot coyetcrrl rmof teh senycroda .treuctsur
Ohret seaswr:n
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Ralcel htta -sellpheaiahc dan e-stebhseta rae asemelpx fo edsoryanc .csttruures sihT cna eb tuhtgoh fo a tnaaoeitfnism fo teh hlpaa .ehxli
orehAtN ywa to gte at it si iav nti:aiomnlei
A. dhonryge gdnnobi dnlowtu eaylrl ahegnc inesc nitreeh nnealia orn gneliyc rea p.ol arB lyG ;g&t lAa st'hldnou nacheg woh preolni si dmfoidei I( amen ti CU,LOD fi herte wsa a ietcrs rednnahci or s,hineomgt ubt nto a aterg r.nw)s Dae ohnngti ot nctieiad htta oaecnlgl girondaedte is trlaeed in sseeropn ot na AA itu.issntubto soA,l in eth ttxceno of IO chih(w si eth ergipntsen l,apconi)mt ew ladaeyr nkwo htta hte oebmlrp nedst'o have gnyanhit to do wiht degrd,anotei meor whti teh hecgna in s/t uttrcfnnEc.reiuuo eHotlsny dotn' o.nkw
eserH’ oen ayw ot lefotiei-procsaenms- csredeade“ gn-dhdbyreono tooa”rnifm: mI’ ont a big naf of tshi inel fo n,gsenioar but ncactilhyel aaeniln
as a sedi prguo has oerm rdyge*hons rof oatitlenp goenyhrd odbnign ahnt igynlec
:
ielann:a
C—H3
eclyi:ng
—H
,So lacteyinhc”l,“ lannaei
duwol rptemi emor rnbhoydnog-ed aotforn,mi ihhcw imgth woall uyo to letiimnea hatt ioc.ceh
aTht ,isda it esesm tlosma slpeiiosbm ot uler uot ouiwtt(h rvey altnhicec engedlwko ro osme vedidpor eieralmnxtpe ada)t atht eht lltgshiy rrleag ninaeal
edso tno ripaim yrdeohng dnbgoni tnweebe lgnecalo llcesoume via rstcie asalp()it enc.rirfeente nI elsprim m,stre sicen enalian
is errl,ga oyu udlwo nkith ahtt it tmus oehwsmo fertreine whit eth -yhernngodbgnido ahtt corcsu tiwh eth weilpdy-t lyginec
.
---
yl*Scittr a,sinepgk tis’ ont the berunm fo dhegynsor but soal eht rstethgn fo eht opield thta ialttifcsae gyenrhdo onigb:dn a ryondheg nuodb to a tosrlgny eltoiteagvcnree cemluelo ilke riufloen lliw appra”“e more svoietip a,nd ,tsuh ygdhdnr-noebo mreo tnslgoyr hiwt a abnyre gxeyno rmdopc(ae twih a dehgoynr ncendcote ot bocnar, rfo )ple.axem
hrrFute darg:nie
From Molecular Biology of the Cell:
Hydroxylysines
and hydroxyprolines
are infrequently found in other animal proteins, although hydroxyproline is abundant in some proteins in the plant cell wall. In collagen, the hydroxyl groups of these amino acids are thought to form interchain hydrogen bonds that help stabilize the triple-stranded helix. Conditions that prevent proline hydroxylation, such as a deficiency of ascorbic acid (vitamin C), have serious consequences. (Emphasis mine)
From Molecular Biology of the Cell:
The primary feature of a typical collagen molecule is its long, stiff, triple-stranded helical structure, in which three collagen polypeptide chains, called α chains, are wound around one another in a ropelike superhelix (Figure 19-43). Collagens are extremely rich in proline and glycine, both of which are important in the formation of the triple-stranded helix. Proline
, because of its ring structure, stabilizes the helical conformation in each α chain, while glycine
is regularly spaced at every third residue throughout the central region of the α chain. Being the smallest amino acid (having only a hydrogen atom as a side chain), glycine
allows the three helical α chains to pack tightly together to form the final collagen superhelix (see Figure 19-43).
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rPyamir ttcrurues = onaim icda ecuosnad ryeeSqnec strtuceur = retcuutsr mrefod wiht a eiglsn moina ciad qeesecun t(bea atpdlee he,est laahp ihelx, trerTeyi)t ac uurercstt = lultiepm dcrnseaoy tcsrtursue nitetcniarg tehtgero mliep(tul tbea ptaleed tshsee cksatde no opt fo ecah ,toehr uaeyrr ar)teQctn reruttsuc = itorpen tsrueurtc dermfo fmor odinlfg fo lla rtyarite rtstuusecr to kaem idginbn sts,ie e.ct
Scnei teh enanlai wsa tpu in pealc fo eth Gc,lnyei eht rrmapiy urtctreus saw ealubn to frmo an apahl lihex nseic lpaha hxiel cetusrtsur edne a atalrircpu ceeesnuq lg(y - -x y) ni deorr ot rmof rhydonge bsndo ot peke het ehixl e.ltabs
awht si olngacle ? a nyaorcesd oinpter ur.rtcuets
ehwn ouy vermeo ecliy,ng eht otms tdunbnaa amoin idca , fmro teh roreurcsp ceomeull illw oyu tge a rroppe asnyroedc tetsucrru ? ON
Gly is lpora, nAaniel is aolnnopr dan cyobpid.ohhr Mieessns ncvoornesnitvea muot.itan seehT sAA heav fdifetrne aielcchm eeporstpri ihhcw elad ot upidestrd oentirp fdlgino ya(cesndro tsr.e)urcut maiSrli to ulG - Val usbisnitotut ni cSklie Clel aiDeses.
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